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Fast Facts

A brief refresher with useful tables, figures, and research summaries

Meningitis & Encephalitis

Acute Bacterial Meningitis

Streptococcus pneumoniae and Neisseria meningitidis are responsible for 80% of all cases of acute bacterial meningitis in adults. Immunocompromised patients have a higher likelihood of fungal, other bacterial, or tuberculous meningitis. In particular, Listeria monocytogenes should be considered as a possible pathogen in patients who are pregnant or older than 50 and in those with impaired cell-mediated immunity due to chronic illness, organ transplantation, HIV, malignancy, or immunosuppressive therapy. Nonbacterial causes of meningitis (aseptic meningitis), often caused by viral infections, are common. However, any patient with suspected meningitis must be presumed to have bacterial meningitis until proven otherwise by urgent lumbar puncture (LP), empiric antibiotics (see table below), and glucocorticoids, if indicated.

Presentation

The majority of patients with acute bacterial meningitis present with two of the following four symptoms:

  • headache

  • fever

  • nuchal rigidity

  • altered mental status (a score <14 on the Glasgow Coma Scale)

Diagnosis

  • history and physical examination: Pay specific attention to immunocompromised state (HIV, transplant recipient, medications, etc.), age, sick contacts, and recent travel.

  • workup: This includes lumbar puncture with opening pressure, cerebrospinal fluid (CSF) analysis (total protein, glucose, cell count, and differential), CSF gram stain and culture, and relevant polymerase chain reaction (PCR) studies (see table below for analysis and interpretation of CSF).

    • Attempt to obtain LP as soon as possible to avoid a sterilized CSF, which can lead to a false-negative result.

  • cranial imaging: Typically, head CT is preferred over brain MRI because it is faster and leads to less delay in diagnosis and therapeutic interventions; imaging should precede LP in adult patients with:

    • new-onset seizures

    • immunocompromised state

    • suspicious signs of increased intracranial pressure or space-occupying lesions

    • moderate-to-severe impairment of consciousness

Cerebrospinal Fluid Analysis in Patients with Suspected Meningitis
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(Adapted from: Adams and Victor’s Principles of Neurology, 10e, 2014, Chapter 2. Imaging, Electrophysiologic, and Laboratory Techniques for Neurologic Diagnosis;Cerebrospinal Fluid Analysis Am Fam Physician 2003; and Harrison’s Manual of Medicine, 19e, 2016, Acute Meningitis and Encephalitis.)

Management

The following algorithm and table summarize management and recommended empiric antimicrobial regimens for treating adults with community-acquired bacterial meningitis. Avoid delay in initiating treatment because it can lead to worse outcomes.

Algorithm for Management of Acute Bacterial Meningitis
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(Source: Community-Acquired Bacterial Meningitis in Adults. N Engl J Med 2006.)

Recommended Empiric Regimens for Treating Adults with Community-Acquired Bacterial Meningitis
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(Source: Community-Acquired Bacterial Meningitis in Adults. N Engl J Med 2006.)

Note: Dexamethasone has been shown to be beneficial in patients with meningitis from S. pneumoniae and should be started in patients suspected of having bacterial meningitis before or concurrent with the first dose of antibiotics. (Read more about dexamethasone treatment for bacterial meningitis in NEJM Journal Watch.)

Nonbacterial or aseptic meningitis is most commonly caused by enteroviruses or herpes simplex virus. (Read more about aseptic meningitis and encephalitis in NEJM Journal Watch.)

Encephalitis

Encephalitis is defined by the Infectious Diseases Society of America (IDSA) as the presence of an inflammatory process of the brain in association with clinical evidence of neurologic dysfunction.

Most infectious cases of encephalitis are caused by viruses, but other infectious causes include bacterial, fungal, protozoal, and helminthic. Additionally, noninfectious causes of encephalitis include autoimmune and paraneoplastic etiologies. However, the etiology of encephalitis is unknown in many patients even after a thorough workup. Therefore, an attempt to identify the cause of encephalitis should be made despite the difficulty and the lack of definitive treatment in many cases.

The clinical presentation of encephalitis is varied and tied to etiology for both infectious and noninfectious types. Successful diagnosis is important for prognosis, prophylaxis, and public health.

Diagnosis

Diagnosis of encephalitis is based on epidemiology, risk factors, clinical features, and diagnostic studies (including CSF, serology, and imaging). The approach to a patient with suspected encephalitis should begin with assessment and stabilization of neurologic emergencies, followed by investigations to determine the likely etiology (e.g., infectious, noninfectious, or autoimmune).

  • thorough history and physical exam (including recent febrile illness, travel history, and history of an immunocompromised state)

    • important components in the history and clinical assessment of encephalitis: new-onset altered level of consciousness, seizures, focal CNS findings, memory deficits, and personality or psychiatric disturbances; in particular, autoimmune etiologies may feature these symptoms

  • lumbar puncture with CSF analysis

  • investigations for infectious cause:

    • laboratory tests and cultures

    • serologic testing for HIV and Epstein-Barr virus (EBV)

    • viral respiratory panel

    • CSF cell counts and cultures with PCR for HSV types 1 and 2, EBV, varicella-zoster virus, West Nile virus, and enteroviruses

    • serum and CSF for cryptococcal antigen if fungi are suspected

  • investigations for autoimmune cause:

    • autoantibody testing in serum and CSF; presence in CSF highly suggestive of autoimmune cause

  • MRI (use CT only if MRI is unavailable or contraindicated)

  • electroencephalogram

  • brain biopsy (rarely indicated)

Workup for Suspected Encephalitis
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(Source: Acute Encephalitis in Immunocompetent Adults. Lancet 2019.)

The following table summarizes common etiologies of encephalitis and associated CSF and MRI findings:

Laboratory Testing and Neuroimaging Characteristics of Selected Pathogens
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(Source: Acute Encephalitis in Immunocompetent Adults. Lancet 2019.)

Autoimmune Antibody-Mediated Encephalitis

In addition to infectious causes, encephalitis may be caused by autoimmune antibody-mediated processes. The IgG class of antibody is predominant in these cases. Some of the responsible antibodies and associated syndromes are presented in the table below. Autoimmune encephalitis may present as part of a paraneoplastic syndrome. These patients should be screened for an underlying neoplastic process (e.g., association of ovarian teratomas to N-methyl-D-aspartate (NMDA) receptor-mediated encephalitis).

Clinical and Immunologic Features and Antibody Effects of Antibody-Mediated Encephalitis
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(Source: Antibody-Mediated Encephalitis. N Engl J Med 2018.)

Treatment

  • Infectious encephalitis

    • Treatment options for infectious encephalitis are generally limited beyond supportive care.

    • Acyclovir should be initiated in all patients with suspected encephalitis pending diagnostic tests to cover HSV, which can be life-threatening if not treated rapidly.

    • Doxycycline should be initiated for suspicion of rickettsial or ehrlichial infection, depending on geographic location and season.

    • Consider empiric acute bacterial meningitis treatment (see above).

  • Autoimmune encephalitis

    • Systemic immunotherapy forms the basis of treatment. In addition, treating the source of the immunologic response (e.g., the primary tumor in cases of paraneoplastic presentations) has been shown to improve the encephalitis.

    • Systemic glucocorticoids, plasma exchange, and intravenous immunoglobulin (IVIG) therapy have been used with the addition of rituximab for refractory or relapsing cases.

See the 2008 IDSA Clinical Practice Guidelines on the management of encephalitis for more information on the epidemiology, clinical features, diagnosis, and treatment of encephalitis.

Research

Landmark clinical trials and other important studies

Research

Clinical Metagenomic Sequencing for Diagnosis of Meningitis and Encephalitis

Wilson MR et al. N Engl J Med 2019.

In this trial, next-generation sequencing applied to cerebrospinal fluid (CSF) obtained from patients with meningitis or encephalitis improved diagnosis of neurologic infections and provided actionable information in some cases.

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The Spectrum of Acute Encephalitis: Causes, Management, and Predictors of Outcome

Singh TD et al. Neurology 2015.

A retrospective review of prognosis and predictors of outcome in acute encephalitis

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Etiology of Aseptic Meningitis and Encephalitis in an Adult Population

Kupila L et al. Neurology 2006.

An epidemiologic review of the major causes of aseptic meningitis and encephalitis in adults in Finland

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How Do I Perform a Lumbar Puncture and Analyze the Results to Diagnose Bacterial Meningitis?

Straus S et al. JAMA 2006.

This article from the JAMA Rational Clinical Examination series discusses strategies for performing and interpreting lumbar punctures.

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Clinical Features and Prognostic Factors in Adults with Bacterial Meningitis

van de Beek D et al. N Engl J Med 2004.

This study from the Netherlands found that in adults presenting with community-acquired acute bacterial meningitis, the sensitivity of the classic triad of fever, neck stiffness, and altered mental status was low, but almost all presented with at least two of the four symptoms of headache, fever, neck stiffness, and altered mental status. The strongest risk factors for an unfavorable outcome were indicative of systemic compromise, a low level of consciousness, and infection with Streptococcus pneumoniae.

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Dexamethasone in Adults with Bacterial Meningitis

de Gans J and van de Beek D for the European Dexamethasone in Adulthood Bacterial Meningitis Study Investigators. N Engl J Med 2002.

Compared with placebo, concomitant administration of dexamethasone was associated with better outcomes in patients with bacterial meningitis, especially among those with pneumococcal meningitis.

Read the NEJM Journal Watch Summary

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Reviews

The best overviews of the literature on this topic

Reviews

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Acute Encephalitis in Immunocompetent Adults

Venkatesan A et al. Lancet 2019.

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Acute Viral Encephalitis

Tyler KL. N Engl J Med 2018.

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Antibody-Mediated Encephalitis

Dalmau J and Graus F. N Engl J Med 2018.

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Community-Acquired Bacterial Meningitis

van de Beek D et al. Nat Rev Dis Primers 2016.

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Acute Bacterial Meningitis in Adults

McGill F at al. Lancet 2016.

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Guidelines

The current guidelines from the major specialty associations in the field

Guidelines

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ESCMID Guideline: Diagnosis and Treatment of Acute Bacterial Meningitis

van de Beek D et al. Clin Microbiol Infect 2016.

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Additional Resources

Videos, cases, and other links for more interactive learning

Additional Resources

Case 40-2019: A 26-Year-Old Returning Traveler with Headache

Stone GS et al. N Engl J Med 2019.

A 26-year-old woman with history of travel to Europe was admitted with severe headache, neck stiffness, and photophobia.

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Case 31-2019: A 45-Year-Old Woman with Headache and Somnolence

Tunkel AR et al. N Engl J Med 2019.

A 45-year-old woman with a history of multiple sclerosis, seronegative inflammatory polyarthritis, and migraine was admitted due to lethargy and decreased verbal output.

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Case 3-2019: A 70-Year-Old Woman with Fever, Headache, and Progressive Encephalopathy

Zachary KC et al. N Engl J Med 2019.

A 70-year-old woman with a history of migraines was admitted due to persistent fever, headache, and altered mental status.

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Lumbar Puncture

Ellenby MS et al. N Engl J Med 2006.

NEJM procedure video

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Case 28-2014 — A 39-Year-Old Man with a Rash, Headache, Fever, Nausea, and Photophobia

Pukkila-Worley R et al. N Engl J Med 2014.

A 39-year-old man was admitted because of a severe headache, nausea, and photophobia.

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